Evolutionary genomics.

Joshua Rest’s lab @ Ecology and Evolution @ Stony Brook University. We use computation and experimentation to study pattern and process in evolutionary genomics.

News

Welcome Postdoc Ben Leyland
New Paper: Biological Network Evolution
Alejandro Gil Gomez awarded Fellowship
Rest recognized for work as a Graduate Program Director
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Projects

Evolutionary genomics of adaptation to climate change
Niamh O'Hara, Joshua Rest
Experimental and empirical research in regulatory evolution
Nina Gu, jordan-chee, Joshua Rest, Kash Bandaralage
Evolutionary genomics of thraustochytrids.
Ben Leyland, Alex Gil Gomez, Mariana Rius, Joshua Rest, Michael Horowitz, Anbarasu Karthikaichamy
Project Video
Metabolic and network evolution
Alex Gil Gomez, Joshua Rest, Dana Opulente
Phylogenomics
Joshua Rest

Meet the Team

Principal Investigator

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Joshua Rest

Associate Professor, Department Chair

Grad Students

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Alex Gil Gomez

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Allyson C. Sheneman

Postdocs

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Ben Leyland

Collaborating Alumni

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Kash Bandaralage

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Mariana Rius

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Priya Aggarwal

Alumni

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Anbarasu Karthikaichamy

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Dana Opulente

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Keffy Kehrli

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Michael Horowitz

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Niamh O'Hara

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Nina Gu

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Whitney Wong

Publications

Wiring between close nodes in molecular networks evolves more quickly than between distant nodes

As species diverge, a wide range of evolutionary processes lead to changes in protein-protein interaction networks and metabolic …
Alejandro Gil-Gomez, Joshua S Rest
PDF Project DOI

Horizontal gene transfer and fusion spread carotenogenesis among diverse heterotrophic protists

Thraustochytrids (phylum: Labyrinthulomycota) are non-photosynthetic marine protists. Some thraustochytrids have crtIBY, a …
Mariana Rius, Joshua S Rest, Gina V Filloramo, Anna M G Novák Vanclová, John M Archibald, Jackie L Collier
PDF Project DOI

The protist Aurantiochytrium has universal subtelomeric rDNAs and is a host for mirusviruses

Summary Viruses are the most abundant biological entities in the world’s oceans, where they play important ecological and …
Jackie L. Collier, Joshua S. Rest, Lucie Gallot-Lavallée, Erik Lavington, Alan Kuo, Jerry Jenkins, Chris Plott, Jasmyn Pangilinan, Chris Daum, Igor V. Grigoriev, Gina V. Filloramo, Anna M. G. Novák Vanclová, John M. Archibald
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Evolution of pathogen response genes associated with increased disease susceptibility during adaptation to an extreme drought in a Brassica rapa plant population

Niamh B O’Hara, Steven J Franks, Nolan C Kane, Silas Tittes, Joshua S Rest
PDF Project

Nicotine Stimulates Peristalsis in N. Vectensis: From Behavior to Nicotinic Receptor Genes

Joanne Figueiredo, Joshua Rest, Sarah Adamo, Rebecca Grella, James Dilger
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