Evolutionary genomics.

Joshua Rest’s lab @ Ecology and Evolution @ Stony Brook University. We use computation and experimentation to study pattern and process in evolutionary genomics.

News

New Preprint: Persistent mirusvirus infection in Aurantiochytrium
Welcome Postdoc Ben Leyland
New Paper: Biological Network Evolution
Alejandro Gil Gomez awarded Fellowship
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Projects

Evolutionary genomics of adaptation to climate change
Niamh O'Hara, Joshua Rest
Experimental and empirical research in regulatory evolution
Nina Gu, jordan-chee, Joshua Rest, Kash Bandaralage
Evolutionary genomics of thraustochytrids.
Ben Leyland, Alex Gil Gomez, Mariana Rius, Joshua Rest, Michael Horowitz, Anbarasu Karthikaichamy
Project Video
Metabolic and network evolution
Alex Gil Gomez, Joshua Rest, Dana Opulente
Phylogenomics
Joshua Rest

Meet the Team

Principal Investigator

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Joshua Rest

Associate Professor, Department Chair

Grad Students

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Alex Gil Gomez

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Allyson C. Sheneman

Postdocs

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Ben Leyland

Undergraduate Researchers

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Demi Uwechue

Collaborating Alumni

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Kash Bandaralage

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Mariana Rius

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Priya Aggarwal

Alumni

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Anbarasu Karthikaichamy

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Dana Opulente

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Keffy Kehrli

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Michael Horowitz

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Niamh O'Hara

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Nina Gu

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Whitney Wong

Publications

Proteome remodeling in the zoospore-to-vegetative cell transition of the stramenopile Aurantiochytrium limacinum reveals candidate ectoplasmic network proteins

Alejandro Gil-Gomez, Ben Leyland, Anbarasu Karthikaichamy, Rebecca C Adikes, David Q Matus, Joshua S Rest, Jackie L Collier

The macroevolution of brain size and cortical association areas in primates

Jeroen B Smaers, Joshua S Rest, Markus Riessland

Persistent mirusvirus infection in the marine protist Aurantiochytrium

John Archibald, Dudley Chung, Nik Brask, Sari Matar, Lucie Gallot-Lavallée, Eric Pringle, Brett Duguay, Cedric Blais, Jessica Latimer, Claudio Slamovits, others

Wiring between close nodes in molecular networks evolves more quickly than between distant nodes

As species diverge, a wide range of evolutionary processes lead to changes in protein-protein interaction networks and metabolic …
Alejandro Gil-Gomez, Joshua S Rest
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Horizontal gene transfer and fusion spread carotenogenesis among diverse heterotrophic protists

Thraustochytrids (phylum: Labyrinthulomycota) are non-photosynthetic marine protists. Some thraustochytrids have crtIBY, a …
Mariana Rius, Joshua S Rest, Gina V Filloramo, Anna M G Novák Vanclová, John M Archibald, Jackie L Collier
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